Vaccines are arguably one of the most important medical innovations in human history. When it comes to which diseases have successfully been targeted with vaccines, however, the playing field is far from equal. Some diseases—like measles or tetanus—have been nearly eradicated due to the widespread use of vaccines that haven’t changed much since they were first created. Other notorious diseases—I’m looking at you, SARS-CoV-2—have been successfully targeted by vaccines which must continuously be updated to keep up with newer, craftier viral variants. Still other deadly diseases—like HIV—lack effective vaccines despite decades of tireless effort by scientists worldwide. What gives?
While it’s certainly true that the difficulty of producing a vaccine against a given pathogen is often determined by the specific biological features of that pathogen, it also pays to consider how vaccines are created and tested. Generally speaking, vaccines can be divided into three broad categories: those that contain weakened or inactivated—but intact—pathogens (live-attenuated vaccines like the measles vaccine fall into this category), those that contain nucleic acids instructing cells to make specific proteins from a pathogen (mRNA vaccines for SARS-CoV-2), and those that contain one or more individual proteins from a pathogen (protein subunit vaccines like the hepatitis-B vaccine). While mRNA vaccines are quickly gaining traction due primarily to their ease of production, protein subunit vaccines are still the go-to for many applications, including HIV.
The proteins that go into subunit vaccines are usually produced by mammalian cells genetically engineered to express them—this engineering can either take the shape of stable transfection, where the vaccine protein is integrated into the genomes of the cells, or transient transfection, in which the protein sequence is inserted into cells by means of a plasmid and does not integrate into their genomes. While stable transfection is the gold standard for subunit production because it leads to a more consistent and reproducible protein product (an important consideration for vaccines that may be administered to millions of patients), it can take up to a year to successfully generate stably-transfected cells for a given protein product. If you put yourself in the shoes of an eager HIV researcher with a new idea for a protein subunit HIV vaccine, the fact that it can take a year to produce your new vaccine (only after which it can start to be tested in animal models, then phase I, then phase II, and—if you’re lucky—phase III clinical trials), it’s easy to see how the vaccine design process is sluggish at best. Protein production via transient transfection has the potential to save valuable time in the vaccine development process—but is there a difference in safety between vaccine proteins produced between stable and transient transfections?